Parallel multiview concept clustering in distributed computing. The proposed method, asc, is compared to the classical spectral clustering and two stateoftheart accelerating methods, i. Parallel spectral clustering, distributed computing, normalized cuts, nearest neighbors, nystrom approximation i. Parallel spectral clustering in distributed systems wenyen chen, yangqiu song, hongjie bai, chihjen lin, and edward chang accepted by ieee transactions on pattern analysis and. We use parpack as underlying eigenvalue decomposition package and f2c to compile fortran code. Parallel spectral clustering in distributed systems ieee. Journal of parallel and distributed computing elsevier. Largescale data mining motivating applications confucius confucius disciples. However,spectral clustering suffers from a scalability problem in both memory use and computational time when the size of a data. Parallel kmeans clustering of remote sensing images based on mapreduce 163 kmeans, however, is considerable, and the execution is timeconsuming and memoryconsuming especially when both the size of input images and the number of expected classifications are large.
To address this problem, we propose a parallel mvc method in a distributed. Table of contents introduction usage examples hardware requirement additional information introduction this directory includes sources used in the following paper. Recall that the input to a spectral clustering algorithm is a similarity matrix s2r n and that the main steps of a spectral clustering algorithm are 1. Parallel spectral clustering in distributed systems wenyen chen, yangqiu song, hongjie bai, chihjen lin, and edward y. Distributed approximate spectral clustering dasc this section presents the proposed algorithm. The spectral methods for clustering usually involve taking the top eigen vectors of some matrix based on the distance between points or other properties and then using them to cluster the various points. Matlab spectral clustering package browse files at. This paper combines the spectral clustering with mapreduce, through evaluation of sparse matrix eigenvalue and computation of distributed cluster, puts forward the improvement ideas and concrete.
A sparse local scaling parallel spectral clustering algorithm based on mpi. It aims at partitioning the data sampled from multiple views. Recently, spectral clustering methods, which exploit pairwise similarities of data instances, have been shown to be more. A dataclustering algorithm on distributed memory multiprocessors. Cis5930 advanced topics in parallel and distributed systems. To perform clustering on large data sets, we investigate two representative ways of approximating the dense similarity matrix. Parallel spectral clustering in distributed systems ieee journals. Research open access efficient parallel spectral clustering. Designing an efficient parallel spectral clustering. A prefix code matching parallel loadbalancing method for solutionadaptive unstructured finite element graphs on distributed memory multicomputers. Our approach to distributed spectral clustering works in two phases. To improve the efficiency of this algorithm, many variants have been developed.
We analyse the time complexity of constructing similarity matrix, doing eigendecomposition and performing kmeans and exploiting spmd parallel structure supported by matlab parallel computing. Power iteration clustering pic is a newly developed clustering algorithm. Present xacml implementations of access control systems follow the same architecture based on abac, but varies in the design of pdp and other components. Spectral clustering sometimes the data s x 1x m is given as a similarity graph a full graph on the vertices.
Parallel spectral clustering in distributed systems wenyen chen, yangqiu song,member, ieee, hongjie bai, chihjen lin, fellow, ieee, and edward y. Bipartite spectral partitioning is a powerful technique to achieve biclustering. May 22, 2018 in modern access control systems, the policy decision point pdp needs to be more efficient to meet the evergrowing demands of web access authorization. Distributed, parallel, and cluster computing authors. Parallel spectral clustering in distributed systems abstract. However, these center based clustering algorithms, such as kmeans, kharmonic means and em, have been employed to illustrate the parallel algorithm for iterative parameter estimations of the present invention. It can also serve as the basis for an attractive graduate course on parallel distributed machine learning and data mining. Parallel kmeans clustering of remote sensing images based.
But as replacing l with 1l would complicate our later discussion, and only. Multiview clustering mvc is an emerging task in data mining. Full version appears on arxiv, 2017, under the same title. Parallel spectral clustering in distributed systems ieee xplore. Ieee transactions on pattern analysis and machine intelligence, 333. Designing an efficient parallel spectral clustering algorithm on multicore processors in julia zenan huo, gang mei, giampaolo casolla, fabio giampaolo pages 211221.
Spectral clustering aarti singh machine learning 1070115781 nov 22, 2010 slides courtesy. Distributed approximate spectral clustering for largescale. Parallel spectral clustering, distributed computing. Spectral clustering algorithms have been shown to be more effective in finding clusters than some traditional algorithms, such as kmeans. A fast spectral clustering method based on growing vector. Chang ieee transactions on pattern analysis and machine intelligence, vol. Parallel spectral clustering in distributed systems wenyen chen, yangqiu song, hongjie bai, chihjen lin, and edward chang accepted by ieee transactions on pattern analysis and machine intelligence, 2010 this. Spectral clustering is computationally expensive unless the graph is sparse and the similarity matrix can be efficiently constructed. Parallel spectral clustering algorithm based on hadoop arxiv.
Implementation and optimization of mpi pointtopoint communications m. An improved spectral graph partitioning algorithm for. Recently, spectral clustering methods, which exploit pairwise similarity of data instances, have been shown to be more e ective than tradi. However, spectral clustering suffers from a scalability problem in both memory use and computational time when the size of a data set is large. Gpgpu but one of the examples of parallel solution of spectral clustering. Parallel algorithms frequent itemset mining acm rs 08 latent dirichlet allocation www 09, aaim 09 clustering ecml 08 support vector machines nips 07 distributed computing perspectives. Parallel spectral clustering in distributed systems ucsb.
Parallel clustering algorithm for largescale biological. Pdf parallel spectral clustering in distributed systems. Scalable centralized and distributed spectral clustering. The networked computers essentially act as a single, much more powerful machine. The time complexity of calculating the eigenvalue decomposition of the similarity matrix is onzk iiter.
Parallel computing is a great way of reducing running time with the cost of complicated codes and tricky debugging. Parallel spectral clustering in distributed systems. The rapid increment in biological data sets scale poses great challenges for sequential algorithms, and makes the parallel clustering algorithms more attractive. Chang abstract spectral clustering algorithms have been shown to be more effective in. A spectral clusteringbased optimal deployment method for. Chang, senior member, ieee abstractspectral clustering algorithms have been shown to be more effective in finding clusters than some traditional algorithms, such as kmeans. However, spectral clustering suffers from a scalability problem. We found an important problem in performing the mvc task. The department of high performance computing,computer network information center, chinese academy of sciences,beijing 100190. Spectral clustering algorithm has been shown to be more effective in finding clusters than most traditional. Parallel spectral clustering algorithm for largescale. Spectral clustering algorithms inevitable exist computational time and memory use problems for largescale spectral clustering, owing to computeintensive and dataintensive. We note that the clusters in figure lh lie at 900 to each other relative to the origin cf.
Distributing a bottomup algorithm is tricky because each distributed process needs the entire dataset to make choices about appropriate clusters. Spectral clustering introduction to learning and analysis of big data kontorovich and sabato bgu lecture 18 1 14. A densitybased algorithm for discovering clusters in large spatial databases. Parallel spectral clustering, distributed computing 1 introduction clustering is one of the most important subroutine in tasks of machine learning and data mining. The distributed data clustering systems 910, 920, 930 implement centerbased data clustering algorithms in a distributed fashion. As a critical process in pdp, evaluation of attributes is often implemented in a simple. However,spectral clustering suffers from a scalability problem in both memory use and. Parallel multiview concept clustering in distributed.
There are approximate algorithms for making spectral clustering more efficient. Scalable centralized and distributed spectral clustering ideals. In addition, we note that there are some parallel algorithms for distributed computing and graphics processing unit gpu computing. Parallel computing is a great way of reducing running time.
Parallel spectral clustering, distributed computing, normalized cuts, nearest neighbors, nystrom approximation. Nov 24, 20 1 parallel spectral clustering in distributed systems wenyen chen,yangqiu song,hongjie bai,chihjen lin,edward y. W e begin by analyzing 1 the traditional method of sparsifying the similarity matrix and 2 the nystrom approximation. Distributed, parallel, and cluster computing authorstitles. Hdfs distributed file system and parallel programming framework graphs as well as build upon hdfs hbase distributed no database. In modern access control systems, the policy decision point pdp needs to be more efficient to meet the evergrowing demands of web access authorization. Clustering is one of the most important subroutine in tasks of machine learning. A distributed pdp model based on spectral clustering for. Spectral clustering algorithm has proved be more effective than most traditional algorithms in finding clusters.
Largescale parallel kdd systems workshop, acm sigkdd, aug. Parallel spectral clustering in distributed systems wenyen chen, yangqiu song, hongjie bai, chihjen lin, edward y. Parallel spectral clustering, distributed computing, normalized cuts, nearest neighbors. Parallel spectral clustering algorithm based on hadoop chapter 1 introduction 1. Parallel spectral clustering distributed computing. Joydeep ghosh, university of texas the contributions in this book run the gamut from frameworks for largescale learning to parallel algorithms to applications, and contributors include many of the top people in this. High performance paralleldistributed biclustering using. In phase 1, individual machines generate a set of representative points of the local data and communicate it to a central machine.
University of chinese academy of sciences,beijing 100190. Designing an efficient parallel spectral clustering algorithm. It performs clustering by embedding data points in a lowdimensional subspace derived from the similarity matrix. Parallel spectral clustering in distributed techylib. In phase 2, the central machine performs spectral clustering on the data and communicates the cluster assignment of the representative points to.
A sparse local scaling parallel spectral clustering. Parallel projection according to observation 2, we construct cdb of item a. Spectral clustering summary algorithms that cluster points using eigenvectors of matrices derived from the data useful in hard nonconvex clustering problems obtain data representation in the lowdimensional space that can be easily clustered variety of methods that use eigenvectors of unnormalized or normalized. Us20030018637a1 distributed clustering method and system. Index termsparallel spectral clustering, distributed computing, normalized cuts, nearest neighbors, nystrm approximation. Parallel local graph clustering julian shuny farbod roostakhorasaniyz kimon fountoulakisyz michael w. Spectral clustering techniques have seen an explosive development and proliferation over the past few years. It performs clustering by embedding data points in a lowdimensional subspace derived from.
We are expecting to present a highly optimized parallel implemention of all the steps of spectral clustering. Spectral clustering algorithms have been shown to be more effective in finding clusters than some traditional algorithms such as kmeans. By wenyen chen, yangqiu song, hongjie bai, chihjen lin and edward y. If the similarity matrix is an rbf kernel matrix, spectral clustering is expensive. Research open access efficient parallel spectral clustering algorithm design for large data sets under cloud computing environment ran jin1,2, chunhai kou1, ruijuan liu1 and yefeng li1 abstract spectral clustering algorithm has proved be more effective than most traditional algorithms in finding clusters. Journal of parallel and distributed computing vol 8. Efficient parallel spectral clustering algorithm design.
What are the differences between a cluster computer and a. May 17, 2019 multiview clustering mvc is an emerging task in data mining. Introduction clustering is one of the most important subroutines in tasks of machine learning and data mining. Although communication and synchronization take a certain amount of time in a distributed system, as the amount of data. University at buffalo the state university of new york. Parallel kmeans clustering of remote sensing images based on. Efficient parallel spectral clustering algorithm design for.
It also needs a list of clusters at its current level so it doesnt add a data point to more than one cluster at the same level. Parallel spectral clustering algorithm based on hadoop. A computer cluster is a single logical unit consisting of multiple computers that are linked through a lan. The journal also features special issues on these topics.
A spectral clusteringbased optimal deployment method for scientific application in cloud computing pei fan, ji wang and zhenbang chen national laboratory for parallel and distributed processing, national university of defense technology, changsha, 410073, china email. Distributed approximate spectral clustering for large. Ieee transactions on parallel and distributed systems 12. It can also serve as the basis for an attractive graduate course on paralleldistributed machine learning and data mining. However, its high computational complexity limits its effect in actual application. Journal of parallel and distributed computing, 686. Siam journal on scientific computing siam society for.
1406 1012 902 859 353 1567 823 1348 1535 1171 502 788 1269 835 425 734 621 649 1624 163 1617 1228 66 209 1426 876 1151 293 433 74 1110 1182 158 1470 362